Movies

Gallery of simulations
Experiments with motors and microtubules

Java code

C++ code

Elementary FRAP simulation using OpenGL and GLUT, developed with Jonathan Ward.

Matlab code

tiffread32.m (v3.2)
Tiffread imports some TIFF files into Matlab, including Metamorph and LSM stacks.
Tiffread.m should work in matlab, and some said that it works also in Octave.
This version is open source and distributed under the GNU GPL license v3.
Many people contributed to Tiffread over the years, please check the list inside the function.

Other useful matlab functions

show_image.m displays an image
show_stack.m displays a stack (using show_image.m)
image_histogram.h calculates an histogram of pixel values
image_background.m detect the background level of the image, when it is predominantly dark (using image_histogram.m)

Older versions

tiffread31.m (v3.1) tiffread30.m (v3.0)
tiffread29.m (v2.9) tiffread27.m (v2.7) tiffread26.m (v2.6)

Microtubule dynamic instability analysis

Function tolset
These suite of matlab functions were used to analyze the dynamic instability of microtubules from time-length records (2005)

Recreation

Postscript code

An Indian recipe written in French
A recipe for a French cake written in English
The recipe for French-Swiss fondue from a German-Swiss written in English