Parameters which begin with mt specify microtubule properties, those which start with as specify aster properties, cx for motor complexes and ha for hands, the single motor which form the complexes.
nbiter number of iterations record number of recorded frames dt time step in second km rigidity of the motor links kT temperature (boltzman constant) visc viscosity of the fluid boxsize size of the box in micro-meters randseed random number generator seed
mtrodlength section length for microtubules mtrigid rigidity of microtubules mtminlength minimum length of microtubules mtinitlength initial length of microtubules mtmaxlength maximum length of microtubules mtdynamic toggle for microtubule's dynamic instability mtdynspeed1 growth/shrinking speed in micro-meters per second mtdyntrans1 transitions rates per seconds
asmax number of asters asmtmax number of microtubule per aster assize size of the overlap used to build an aster
cxmax number of complexes cxdiff diffusion coefficient for the complexes cxhatype1 type of hand forming the complex cxhatype2 type of hand forming the complex
ghmax number of grafted motors ghinit position of the grafted motors
hamodel force dependence model for the hand haattachrate attachment rate of hand, per second haattachdist reach distance for hand binding haspeed unloaded speed of hand haforce stalling force of hand hadetachrate detachement rate of attached hand, per second haenddetach detachement model at ends of microtubules haenddetachrate detachement rate at ends of microtubules